BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018D01SP1|AL427301
(623 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1598 1209 0.0
>3x_Contig1598
Length = 11902
Score = 1209 bits (608), Expect = 0.0
Identities = 618/622 (99%), Gaps = 1/622 (0%)
Strand = Plus / Plus
Query: 1 atttcaaacccagnttttttcgatcttggtatattaatcaatgattactgtcgtcaacga 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7195 atttcaaacccag-ttttttcgatcttggtatattaatcaatgattactgtcgtcaacga 7253
Query: 61 ttctataacgatttattgcgaataaatagataaaagaaatgcaaagagaaaacgaacggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7254 ttctataacgatttattgcgaataaatagataaaagaaatgcaaagagaaaacgaacggt 7313
Query: 121 caaaatatcggaaatatcccctctaaactgctagttcgcttggcttttcgtttcttgcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7314 caaaatatcggaaatatcccctctaaactgctagttcgcttggcttttcgtttcttgcct 7373
Query: 181 ctgagataaattcgctaaattgacttatcaatatgttaagagacctttggcatgctctag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7374 ctgagataaattcgctaaattgacttatcaatatgttaagagacctttggcatgctctag 7433
Query: 241 tatctttcctccaggattccatactatcgaagaaaaacagctatgaactacggtctcact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7434 tatctttcctccaggattccatactatcgaagaaaaacagctatgaactacggtctcact 7493
Query: 301 tctgacgagttaaaaamatgaaaaactgaagttcaagtcacgtgatacatgtgtcactct 360
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7494 tctgacgagttaaaaaaatgaaaaactgaagttcaagtcacgtgatacatgtgtcactct 7553
Query: 361 tacctttctgtataacaatggtaaatacaagtrgcaatgagagcatttgatcaatatagc 420
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 7554 tacctttctgtataacaatggtaaatacaagtagcaatgagagcatttgatcaatatagc 7613
Query: 421 ctctcagatcgtatttggtaggagtatgacttgtatgagggcttatatctgtgcatgcga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7614 ctctcagatcgtatttggtaggagtatgacttgtatgagggcttatatctgtgcatgcga 7673
Query: 481 tacttatcagcactcattctaaaaagacttgtaccgaggattccagagttttaccctacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7674 tacttatcagcactcattctaaaaagacttgtaccgaggattccagagttttaccctacc 7733
Query: 541 taccaaaccttgtttgacactattctcttctgtcttttcttttcccgatgttcatttaav 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7734 taccaaaccttgtttgacactattctcttctgtcttttcttttcccgatgttcatttaaa 7793
Query: 601 attttcactttctcctatatat 622
||||||||||||||||||||||
Sbjct: 7794 attttcactttctcctatatat 7815
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4484
Number of Sequences: 1807
Number of extensions: 4484
Number of successful extensions: 72
Number of sequences better than 1.0e-20: 1
length of query: 623
length of database: 10,358,551
effective HSP length: 16
effective length of query: 607
effective length of database: 10,329,639
effective search space: 6270090873
effective search space used: 6270090873
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)